Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs673936 chr18:76168821 A/G 0 299 0.87 24.9 21.23 KM Plot
CESC rs67663798 chr3:129146208 C/G 6.67E-5 297 21.85 21.33 9.17 KM Plot
CESC rs6770367 chr3:100336822 A/G 1.47E-5 291 21.73 19.35 12.05 KM Plot
CESC rs6780536 chr3:161058726 T/C 4.1E-5 297 25.27 20.85 19 KM Plot
CESC rs6783996 chr3:100336891 G/A 1.65E-5 287 21.73 19.35 12.05 KM Plot
CESC rs67904005 chr3:129194518 A/G 4.73E-5 295 21.47 20.63 14.73 KM Plot
CESC rs6791213 chr3:161033721 A/G 7.54E-5 295 28.18 20.85 19 KM Plot
CESC rs6791385 chr3:20136439 A/C 3.55E-5 291 21.23 27.9 11.63 KM Plot
CESC rs6793985 chr3:20136485 T/C 3.44E-5 292 21.23 27.85 11.63 KM Plot
CESC rs6797066 chr3:161008725 T/A 7.65E-5 296 28.58 20.43 19.05 KM Plot
CESC rs68181680 chr3:129191834 T/C 4.73E-5 295 21.47 20.63 14.73 KM Plot
CESC rs6857597 chr4:57935976 C/T 2.14E-8 296 21.2 30.18 11.6 KM Plot
CESC rs689777 chr17:72884181 A/G 2.03E-5 296 16.87 27.9 21.17 KM Plot
CESC rs690019 chr17:72890192 T/C 2.16E-5 299 15.33 27.9 21.2 KM Plot
CESC rs690616 chr17:72888361 C/G 1.62E-5 299 16.87 27.77 21.2 KM Plot